BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B04SP1|AL429012
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1582 1707 0.0
>3x_Contig1582
Length = 14087
Score = 1707 bits (861), Expect = 0.0
Identities = 861/861 (100%)
Strand = Plus / Plus
Query: 1 gatctcttatctatacaacatcttgcgtaacaacttctcatctgtatcgaaatctttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5326 gatctcttatctatacaacatcttgcgtaacaacttctcatctgtatcgaaatctttggc 5385
Query: 61 taactcatcaaaactttcctctatgccaaagaacgaacagatgtctacacaatccttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5386 taactcatcaaaactttcctctatgccaaagaacgaacagatgtctacacaatccttcaa 5445
Query: 121 attctggattcatcaagataatttaatggaagtgaaaactaatatcttgagacgtttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5446 attctggattcatcaagataatttaatggaagtgaaaactaatatcttgagacgtttgcc 5505
Query: 181 agtgttagtctatgctcaagcaccctctgagaacgaagacttgatcgatagattggagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5506 agtgttagtctatgctcaagcaccctctgagaacgaagacttgatcgatagattggagtc 5565
Query: 241 taatcttttgaatgacgacggtggtccagcaatgtccagttccagtaacgaaaccgatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5566 taatcttttgaatgacgacggtggtccagcaatgtccagttccagtaacgaaaccgatgt 5625
Query: 301 gggtcatttgaacaaaagttttgaacctgtcatctccacgctatatttcgataacgagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5626 gggtcatttgaacaaaagttttgaacctgtcatctccacgctatatttcgataacgagtt 5685
Query: 361 cttcgaattgtacaacaacaagttattgaaaaccaactctgctccaactttgagattgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5686 cttcgaattgtacaacaacaagttattgaaaaccaactctgctccaactttgagattgag 5745
Query: 421 atggattggtaaattgaacgacaagccggacattttccttgaaaagagaatgtttgtaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5746 atggattggtaaattgaacgacaagccggacattttccttgaaaagagaatgtttgtaga 5805
Query: 481 caacgaggattcttcttcgaccgatttcgatgaaacaaggattaagttgaaaccaaaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5806 caacgaggattcttcttcgaccgatttcgatgaaacaaggattaagttgaaaccaaaatt 5865
Query: 541 catcaatggatttattttcaacggtgataccgaatataaggaaatgatgctcaagaaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5866 catcaatggatttattttcaacggtgataccgaatataaggaaatgatgctcaagaaatt 5925
Query: 601 gaaggaatccggctcaagcaacgatactaccaagaaattggaaaacaatttcgattccat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5926 gaaggaatccggctcaagcaacgatactaccaagaaattggaaaacaatttcgattccat 5985
Query: 661 ccaacaattcattcttgaaaacgaattacaaccagttctaagaactttataccaaagaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5986 ccaacaattcattcttgaaaacgaattacaaccagttctaagaactttataccaaagaac 6045
Query: 721 tgcattccaaattccaggtgatgaccgtgtaagaatcactatcgattcagatatccttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6046 tgcattccaaattccaggtgatgaccgtgtaagaatcactatcgattcagatatccttta 6105
Query: 781 catccgtgaagattcctttgacaaggaccgtccaatcagagaccctcatcactggcacag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6106 catccgtgaagattcctttgacaaggaccgtccaatcagagaccctcatcactggcacag 6165
Query: 841 atctgacattgattctaacgt 861
|||||||||||||||||||||
Sbjct: 6166 atctgacattgattctaacgt 6186
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8046
Number of Sequences: 1807
Number of extensions: 8046
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)